Python手写随机森林算法:从原理到泰坦尼克号实战
本文详细解析了基于Python实现的随机森林算法原理,涵盖有放回抽样、特征子集选取及不剪枝策略。通过Kaggle泰坦尼克号101数据集进行实战建模,展示了数据预处理、Gini系数分裂逻辑及投票机制。文中对比了手写模型与scikit-learn库的性能差异,并提供了提升准确率的特征工程与参数调整方向。
本文分享一个使用Python实现的随机森林算法示例,供读者参考学习。
随机森林是数据挖掘领域广泛使用的分类预测算法,其核心是以分类或回归决策树作为基分类器。该算法包含几个关键要点:
首先,对大小为m的数据集进行样本量同样为m的有放回抽样;其次,随机抽取K个特征形成特征子集,样本量确定可采用平方根或自然对数等方法;再次,每棵树完全生成且不进行剪枝处理;最后,每个样本的预测结果由所有树的预测通过投票产生(回归任务中则为各树叶节点的平均值)。
Python知名机器学习库scikit-learn的官方文档对该算法有详尽介绍,可参考链接:http://scikit-learn.org/stable/modules/ensemble.html#random-forests
出于个人研究与测试目的,本文基于经典的Kaggle 101泰坦尼克号乘客数据集建立模型并进行评估。比赛页面及数据集下载地址为:https://www.kaggle.com/c/titanic
泰坦尼克号沉没是历史上著名的海难事件。通过数据挖掘方法研究具体历史问题颇具趣味。模型的主要目标是根据乘客的性别、年龄、舱位、登船地点等特征,预测其生还可能性,这属于典型的二分类预测问题。数据集的字段名及实例如下:
| PassengerId | Survived | Pclass | Name | Sex | Age | SibSp | Parch | Ticket | Fare | Cabin | Embarked |
| 1 | 0 | 3 | Braund, Mr. Owen Harris | male | 22 | 1 | 0 | A/5 21171 | 7.25 | S | |
| 2 | 1 | 1 | Cumings, Mrs. John Bradley (Florence Briggs Thayer) | female | 38 | 1 | 0 | PC 17599 | 71.2833 | C85 | C |
| 3 | 1 | 3 | Heikkinen, Miss. Laina | female | 26 | 0 | 0 | STON/O2. 3101282 | 7.925 | S | |
| 4 | 1 | 1 | Futrelle, Mrs. Jacques Heath (Lily May Peel) | female | 35 | 1 | 0 | 113803 | 53.1 | C123 | S |
| 5 | 0 | 3 | Allen, Mr. William Henry | male | 35 | 0 | 0 | 373450 | 8.05 | S |
需要说明的是,SibSp代表sister/brother/spouse,即乘客随行兄弟姐妹及配偶的人数;Parch代表parents/children,即父母及子女人数。
以下展示完整的数据处理及建模过程,环境基于ubuntu系统搭配python 3.4(推荐使用已集成pandas、numpy、sklearn等常用包的anaconda科学计算环境)。
为节省切换输入法时间,代码主要注释使用英文,中文注释为后续补充。
# -*- coding: utf-8 -*-
"""
@author: kim
"""
from model import *#载入基分类器的代码
#ETL:same procedure to training set and test set
training=pd.read_csv('train.csv',index_col=0)
test=pd.read_csv('test.csv',index_col=0)
SexCode=pd.DataFrame([1,0],index=['female','male'],columns=['Sexcode']) #将性别转化为01
training=training.join(SexCode,how='left',on=training.Sex)
training=training.drop(['Name','Ticket','Embarked','Cabin','Sex'],axis=1)#删去几个不参与建模的变量,包括姓名、船票号,船舱号
test=test.join(SexCode,how='left',on=test.Sex)
test=test.drop(['Name','Ticket','Embarked','Cabin','Sex'],axis=1)
print('ETL IS DONE!')
#MODEL FITTING
#===============PARAMETER AJUSTMENT============
min_leaf=1
min_dec_gini=0.0001
n_trees=5
n_fea=int(math.sqrt(len(training.columns)-1))
#==============================================
'''''
BEST SCORE:0.83
min_leaf=30
min_dec_gini=0.001
n_trees=20
'''
#ESSEMBLE BY RANDOM FOREST
FOREST={}
tmp=list(training.columns)
tmp.pop(tmp.index('Survived'))
feaList=pd.Series(tmp)
for t in range(n_trees):
# fea=[]
feasample=feaList.sample(n=n_fea,replace=False)#select feature
fea=feasample.tolist()
fea.append('Survived')
# feaNew=fea.append(target)
subset=training.sample(n=len(training),replace=True)#generate the dataset with replacement
subset=subset[fea]
# print(str(t)+' Classifier built on feature:')
# print(list(fea))
FOREST[t]=tree_grow(subset,'Survived',min_leaf,min_dec_gini) #save the tree
#MODEL PREDICTION
#======================
currentdata=training
output='submission_rf_20151116_30_0.001_20'
#======================
prediction={}
for r in currentdata.index:#a row
prediction_vote={1:0,0:0}
row=currentdata.get(currentdata.index==r)
for n in range(n_trees):
tree_dict=FOREST[n] #a tree
p=model_prediction(tree_dict,row)
prediction_vote[p]+=1
vote=pd.Series(prediction_vote)
prediction[r]=list(vote.order(ascending=False).index)[0]#the vote result
result=pd.Series(prediction,name='Survived_p')
#del prediction_vote
#del prediction
#result.to_csv(output)
t=training.join(result,how='left')
accuracy=round(len(t[t['Survived']==t['Survived_p']])/len(t),5)
print(accuracy)
上述代码实现了随机森林算法。如前所述,随机森林由一系列决策树组合而成。决策树在每次分裂时,使用Gini系数衡量当前节点的“不纯净度”。若按某特征的某个分裂点划分数据集后,能使Gini系数下降最多(显著降低输出变量不纯度),则选定该特征及分裂点为当前最佳分割。具体代码如下:
# -*- coding: utf-8 -*-
"""
@author: kim
"""
import pandas as pd
import numpy as np
#import sklearn as sk
import math
def tree_grow(dataframe,target,min_leaf,min_dec_gini):
tree={} #renew a tree
is_not_leaf=(len(dataframe)>min_leaf)
if is_not_leaf:
fea,sp,gd=best_split_col(dataframe,target)
if gd>min_dec_gini:
tree['fea']=fea
tree['val']=sp
# dataframe.drop(fea,axis=1) #1116 modified
l,r=dataSplit(dataframe,fea,sp)
l.drop(fea,axis=1)
r.drop(fea,axis=1)
tree['left']=tree_grow(l,target,min_leaf,min_dec_gini)
tree['right']=tree_grow(r,target,min_leaf,min_dec_gini)
else:#return a leaf
return leaf(dataframe[target])
else:
return leaf(dataframe[target])
return tree
def leaf(class_lable):
tmp={}
for i in class_lable:
if i in tmp:
tmp[i]+=1
else:
tmp[i]=1
s=pd.Series(tmp)
s.sort(ascending=False)
return s.index[0]
def gini_cal(class_lable):
p_1=sum(class_lable)/len(class_lable)
p_0=1-p_1
gini=1-(pow(p_0,2)+pow(p_1,2))
return gini
def dataSplit(dataframe,split_fea,split_val):
left_node=dataframe[dataframe[split_fea]<=split_val]
right_node=dataframe[dataframe[split_fea]>split_val]
return left_node,right_node
def best_split_col(dataframe,target_name):
best_fea=''#modified 1116
best_split_point=0
col_list=list(dataframe.columns)
col_list.remove(target_name)
gini_0=gini_cal(dataframe[target_name])
n=len(dataframe)
gini_dec=-99999999
for col in col_list:
node=dataframe[[col,target_name]]
unique=node.groupby(col).count().index
for split_point in unique: #unique value
left_node,right_node=dataSplit(node,col,split_point)
if len(left_node)>0 and len(right_node)>0:
gini_col=gini_cal(left_node[target_name])*(len(left_node)/n)+gini_cal(right_node[target_name])*(len(right_node)/n)
if (gini_0-gini_col)>gini_dec:
gini_dec=gini_0-gini_col#decrease of impurity
best_fea=col
best_split_point=split_point
#print(col,split_point,gini_0-gini_col)
return best_fea,best_split_point,gini_dec
def model_prediction(model,row): #row is a df
fea=model['fea']
val=model['val']
left=model['left']
right=model['right']
if row[fea].tolist()[0]<=val:#get the value
branch=left
else:
branch=right
if ('dict' in str( type(branch) )):
prediction=model_prediction(branch,row)
else:
prediction=branch
return prediction
实际上,上述代码仍有较大的效率提升空间。在数据集规模不大但生成较多树(如100棵)的情况下,运行速度会显著变慢。此外,将预测结果提交至Kaggle评测发现,测试集上的正确率略低于使用sklearn相应包预测的结果(0.77512)。若要提升准确率,主要方向包括:构造新特征以及调整现有模型参数。
此处抛砖引玉,欢迎大家对建模思路和算法实现方法提出修改意见。
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